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E-ISSN : 2713-8615

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Vol.7 No.3
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A report of six unrecorded radiation-resistant bacterial species isolated from soil in Korea in 2018

Journal of Species Research / Journal of Species Research, (E)2713-8615
2018, v.7 no.3, pp.222-230
https://doi.org/10.12651/JSR.2018.7.3.222
맹수현 (고려대학교)
김명겸 (서울여자대학교)
Gayathri Subramani (서울여자대학교)
김주영 (서울여자대학교 자연과학연구소)
장준희 (서울여자대학교)
강명석 (국립생물자원관)
이기은 (국립생물자원관)
이은영 (국립생물자원관)
스리니바산 사티야라지 (서울여자대학교)
맹수현, 김명겸, Gayathri, S. , 김주영, 장준희, 강명석, 이기은, 이은영, & 스리니바산 사티야라지. (2018). . Journal of Species Research, 7(3), 222-230, https://doi.org/10.12651/JSR.2018.7.3.222
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Abstract

Six bacterial strains 18JY42-3, 18SH, 18JY76-11, 17J11-11, 18JY14-14, and 18JY15-11 assigned to the phylum Proteobacteria, Firmicutes, and Actinobacteria were isolated from soil samples in Korea. The Cohnella species, strain 18JY42-3 was Gram-stain-positive, short rod-shaped and beige-colored. The Methylobacterium species, strains 18SH and 18JY76-11 were Gram-stain-negative, short rod-shaped and pinkcolored. The Microterricola species, strain 17J11-11 was Gram-stain-positive, short rod-shaped and yellowcolored. The Paenarthrobacter species, strains 18JY14-14 and 18JY15-11 were Gram-stain-positive, short rod-shaped and white-colored. Phylogenetic analysis based on 16S rRNA gene sequence showed that strains 18JY42-3, 18SH, 18JY76-11, 17J11-11, 18JY14-14, and 18JY15-11 were most closely related Cohnella rhizosphaerae (MH497628; 98.8%), Methylobacterium goesingense (MH497632; 99.1%), Methylobacterium populi (MH497635; 99.9%), Microterricolagilva (MH504108; 98.4%), Paenarthrobacter nicotinovorans (MH497641; 100%), and Paenarthrobacter nitroguajacolicus (MH497646; 99.2%), respectively. All the six unrecorded strains showed resistance to UV radiation. This is the first report of these six species in Korea.

keywords
16S rRNA, bacterial diversity, unreported species, Proteobacteria, Firmicutes, Actinobacteria

참고문헌

1.

Atlas, R. 1997. Principles of Microbiology. New York: Mc-Grill-Hill.

2.

Felsenstein, J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-791.

3.

Garrity, G.M., J.A., Bell and T. Lilburn. 2005a. Phylum XIV. Proteobacteria phyl. nov. class III. Gammaproteobacteria class. nov. In: Bergey's Manual of Systematic Bacteriology, 2nd edn, vol. 2, p. 1. Edited by Brenner, D., J., Krieg, N.R., Staley, J. Tand, G.M. Garrity. New York: Springer.

4.

Im, S., D. Song, M. Joe, D. Kim, D.H. Park and S. Lim. 2013. Comparative survival analysis of 12 histidine kinase mutants of Deinococcus radiodurans after exposure to DNA-damaging agents. Bioprocess and Biosystems Engineering 36:781-789.

5.

Kampfer, P., N. Lodders, B. Huber, E. Falsen and H.J. Busse. 2008. Deinococcus aquatilis sp. nov., isolated from water. International Journal of Systematic and Evolutionary Microbiology 58:2803-2806.

6.

Kimura, M. 1983. The neutral theory of molecular evolution. Cambridge University Press.

7.

Saitou, N. and M. Nei. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Molecular Biology and Evolution 4:406-425.

8.

Selvam, K., J.R. Duncan, M. Tanaka and J.R. Battista. 2013. DdrA, DdrD, and PprA: components of UV and mitomycin C resistance in Deinococcus radiodurans R1. PLoS One 8(7):e69007.

9.

Schrempf, H. 2001. Recognition and degradation of chitin by streptomycetes. Antonie van Leeuwenhoek 79:285-289.

10.

Shin, N.R., T.W. Whon and J.W. Bae. 2015. Proteobacteria: microbial signature of dysbiosis in gut microbiota. Trends in Biotechnology 33(9):496-503.

11.

Stackebrandt, E., F.A. Rainey and N.L. Ward-Rainey. 1997. Proposal for a new hierarchic classification system, Actinobacteria classis nov. International Journal of Systemic Bacteriology 47:479-491.

12.

Tamura, K., D. Peterson, N. Peterson, G. Stecher, M. Nei and S. Kumar. 2011. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular Biology and Evolution 28:2731-2739.

13.

Weisburg, W.G., S.M. Barns, D.A. Pelletier and D.J. Lane. 1991. 16S ribosomal DNA amplification for phylogenetic study. Journal of Bacteriology 173:697-703.

14.

Williams, K.P., B.W. Sobral and A.W. Dickerman. 2007. A robust species tree for the Alphaproteobacteria. Journal of Bacteriology 189:4578-4586.

15.

Willems, A., J. De Ley, M. Gillis and K. Kersters. 1991. Comamonadaceae, a new family encompassing the acidovorans rRNA complex, including Variovorax paradoxus gen. nov., comb. nov., for Alcaligenes paradoxus (Davis) 1969. International Journal of Systematic Bacteriology 41:445-450.

16.

Woese, C.R. 1987. Bacterial evolution. Microbiological Reviews 51(2): 221-271.

17.

Yutin, N., P. Puigbo, E.V. Koonin and Y.I. Wolf. 2012. Phylogenomics of prokaryotic ribosomal proteins. PLoS ONE 7:e36972.

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