• P-ISSN2233-4203
  • E-ISSN2093-8950
  • ESCI, SCOPUS, KCI

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  • P-ISSN 2233-4203
  • E-ISSN 2093-8950

Mass Spectrometric Determination of Zn2+ Binding/Dissociation Constant for Zinc Finger Peptides

Mass Spectrometry Letters / Mass Spectrometry Letters, (P)2233-4203; (E)2093-8950
2015, v.6 no.1, pp.7-12
https://doi.org/10.5478/MSL.2015.6.1.7
Lee Choong Sik (Sogang University, Ministry of National Defense)
Park Soo jin (Sogang University)
Lee Jae Young (Dongguk University)
Park Sungsu (Sungkyunkwan University)
Jo Kyubong (Sogang University)
Oh Han Bin (Sogang University)
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Abstract

In the present study, we proposed a simple ESI-MS model for determining Zn2+ binding (or dissociation) constants forzinc finger peptides (ZFPs) with a unique ββα fold consensus. The ionization efficiency (response) factors for this model, i.e., α andβ, could be determined for ZiCo ZFP with a known Zn2+ binding constant. We could determine the binding constants for other ZFPsassuming those with a ββα consensus conformation have the same α/β response ratio. In general, the ZPF dissociation constantsexhibited Kd values of 10-7~10-9 M, while Kd values for a negative control non-specific Zn2+peptides were high, e.g., 5.5×10-6 M and4.3×10-4 M for BBA1 and melittin, respectively.

keywords
zinc finger, binding constant, electrospray-mass spectrometry, zinc ion


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Submission Date
2015-01-23
Revised Date
2015-03-03
Accepted Date
2015-03-04
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