- KOREAN
- P-ISSN2287-8327
- E-ISSN2288-1220
- SCOPUS, KCI
ISSN : 2287-8327
Soil development and bacterial community shifts along the chronosequence of the Midtre Lovénbreen glacier foreland in Svalbard
Ji Young Jung (Arctic Research Center, Korea Polar Research Institute, KIOST)
Dominique Laffly (Department of Geography, University of Toulouse 2)
Abstract
Global warming has accelerated glacial retreat in the high Arctic. The exposed glacier foreland is an ideal place to study chronosequential changes in ecosystems. Although vegetation succession in the glacier forelands has been studied intensively, little is known about the microbial community structure in these environments. Therefore, this study focused on how glacial retreat influences the bacterial community structure and its relationship with soil properties. This study was conducted in the foreland of the Midtre Lovénbreen glacier in Svalbard (78.9°N). Seven soil samples of different ages were collected and analyzed for moisture content, pH, soil organic carbon and total nitrogen contents, and soil organic matter fractionation. In addition, the structure of the bacterial community was determined via pyrosequencing analysis of 16S rRNA genes. The physical and chemical properties of soil varied significantly along the distance from the glacier; with increasing distance, more amounts of clay and soil organic carbon contents were observed. In addition, Cyanobacteria, Firmicutes, and Actinobacteria were dominant in soil samples taken close to the glacier, whereas Acidobacteria were abundant further away from the glacier. Diversity indices indicated that the bacterial community changed from homogeneous to heterogeneous structure along the glacier chronosequence/distance from the glacier. Although the bacterial community structure differed on basis of the presence or absence of plants, the soil properties varied depending on soil age. These findings suggest that bacterial succession occurs over time in glacier forelands but on a timescale that is different from that of soil development.
- keywords
- bacterial succession, chronosequence, glacier foreland, high arctic, soil development
Reference
Baldock JA, Oades JA, Waters AG, Peng X, Vassallo AM, Wilson MA. 1992. Aspects of the chemical structure of soil organic materials as revealed by solid-state 13C NMR spectroscopy. Biogeochemistry 16: 1-42.
Bernasconi SM, Bauder A, Bourdon B, Brunner I, Bünemann E, Chris I, Derungs N, Edwards P, Farinotti D, Frey B, Frossard E, Furrer G, Gierga M, Göransson H, Gülland K, Hagedorn F, Hajdas I, Hindshaw R, Ivy-Ochs S, Jansa J, Jonas T, Kiczka M, Kretzschmar R, Lemarchand E, Luster J, Magnusson J, Mitchell EAD, Venterink HO, Plötze M, Reynolds B, Smittenberg RH, Stähli M, Tamburini F, Tipper EF, Wacker L, Welc M, Wiederhold JG, Zeyer J, Zimmermann S, Zumsteg A. 2011. Chemical and biological gradients along the Damma glacier soil chronosequence, Switzerland. Vadose Zone J 10: 867-883.
Brankatschk R, Töwe S, Kleineidam K, Schloter M, Zeyer J. 2011. Abundances and potential activities of nitrogen cycling microbial communities along a chronosequence of a glacier forefield. ISME J 5: 1025-1037.
Bunge J, Barger K. 2008. Parametric models for estimating the number of classes. Biom J 50: 971-982.
Dümig A, Häusler W,Steffens M, Kögel-Knabner I. 2012. Clay fractions from a soil chronosequence after glacier retreat reveal the initial evolution of organo–mineral associations. Geochim Cosmochim Acta 85: 1-18.
Esperschütz J, Pérez-de-Mora A, Schreiner K, Welzl G, Buegger F, Zeyer J, Hagedorn F, Munch JC, Schloter M. 2011. Microbial food web dynamics along a soil chronosequence of a glacier forefield. Biogeosciences 8: 3283-3294.
Fierer N, Jackson RB. 2005. The diversity and biogeography of soil bacterial communities. Proc Natl Acad Sci USA 103: 626-631.
Hodkinson ID, Coulson SJ, Webb NR. 2003. Community assembly along proglacial chronosequences in the high Arctic: vegetation and soil development in north-west Svalbard. J Ecol 91: 651-663.
Hugenholtz P, Goebel BM, Pace NR. 1998. Impact of cultureindependent studies on the emerging phylogenetic view bacterial diversity. J Bacteriol 180: 4765-4774.
Huggett RJ. 1998. Soil chronosequences, soil development, and soil evolution: a critical review. Catena 32: 155-172.
Hwang K, Oh J, Kim TK, Kim BK, Yu DS, Hou BK, Caetano-Anollés G, Hong SG, Kim KM. 2013. Clustom: a novel method for clustering 16s rRNA next generation sequences by overlap minimization. PLoS ONE 8: e62623.
IPCC. 2013. Climate change 2013: The physical science basis. Contribution of Working Group I to the Fifth Assessment Report of the Intergovernmental Panel on Climate Change (Stocker TF, Qin D, Plattner G-K, Tignor MMB, Allen SK, Boschung J, Nauels A, Xia Y, Bex V, Midgley PM, eds). Cambridge University Press, Cambridge, and New York, NY, pp. 1–30, doi:10.1017/CBO9781107415324.004.
Jacobson Jr GL, Birks HJB. 1980. Soil development on recent end moraines of the Klutlan Glacier, Yukon Territory, Canada. Quat Res 14: 87-100.
Jangid K, Whitman WB, Condron LM, Turner BL, Williams MA. 2013. Soil bacterial community succession during long‐term ecosystem development. Mol Ecol 22: 3415-3424.
Jones RT, Robeson MS, Lauber CL, Hamady M, Knight R, Fierer N. 2009. A comprehensive survey of soil acidobacterial diversity using pyrosequencing and clone library analyses. ISME J 3: 442-453.
Jung JY, Lee K, Lim HS, Kim H, Lee EJ, Lee YK. 2014. Soil organic carbon characteristics relating to geomorphology near Vestre Lovénbreen moraine in Svalard. J Ecol Environ 37: 69-79.
Kim M, Morrison M, Yu Z. 2011a. Evaluation of different partial 16S rRNA gene sequence regions for phylogenetic analysis of microbiomes. J Microbiol Methods 84: 81-87.
Kim OS, Cho YJ, Lee K, Yoon SH, Kim M, Na HS, Park SC, Jeon YS, Lee JH, Yi HN, Won SG, Chun J. 2011b. Introducing EzTaxon-e: a prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species. Int J Syst Evol Microbiol 62: 716-721.
Knelman JE, Legg TM, O’Neill SP, Washenberger CL, González A, Cleveland CC, Nemergut DR. 2012. Bacterial community structure and function change in association with colonizer plants during early primary succession in a glacier forefield. Soil Biol Biochem 46: 172-180.
Kögel-Knabner I, Hatcher PG, Tegelaar EW, Leeuw JW. 1992. Aliphatic components of forest soil organic matter as determined by solid-state 13C NMR and analytical pyrolysis. Sci Total Environ 113: 89-106.
Kume A, Bekku YS, Hanba YT, Kanda H. 2003. Carbon isotope discrimination in diverging growth forms of Saxifraga oppositifolia in different successional stages in a High Arctic glacier foreland. Arct Antarct Alp Res 35: 377-383.
Lauber CL, Hamady M, Knight R, Fierer N. 2009. Pyrosequencing-based assessment of soil pH as a predictor of soil bacterial community structure at the continental scale. Appl Environ Microbiol 75: 5111-5120.
Marín-Spiotta E, Swanston CW, Torn MS, Silver WL, Burton SD. 2008. Chemical and mineral control of soil carbon turnover in abandoned tropical pastures. Geoderma 143: 49-62.
Matthews JA. 1992. The ecology of recently-deglaciated terrain: A geoecological approach to glacier forelands and primary succession. Cambridge University, Cambridge.
Messer AC. 1988. Regional variations in rates of pedogenesis and the influence of climatic factors on moraine chronosequences, southern Norway. Arctic Alp Res 20: 31-39.
Miniaci C, Bunge M, Duc L, Edwards I, Bürgmann H, Zeyer J. 2007. Effects of pioneering plants on microbial structures and functions in a glacier forefield. Biol Fertil Soils 44: 289-297.
Moreau M, Laffly D, Joly D, Brossard T. 2005. Analysis of plant colonization on an arctic moraine since the end of the Little Ice Age using remotely sensed data and a Bayesian approach. Remote Sens Environ 99: 244-253.
Moreau M, Mercier D, Laffly D, Roussel E. 2008. Impacts of recent paraglacial dynamics on plant colonization: A case study on Midtre Lovénbreen foreland, Spitsbergen (79°N). Geomorphology 95: 48-60.
Nemergut DR, Anderson SP, Cleveland CC, Martin AP, Miller AE, Seimon A, Schmidt SK. 2007. Microbial community succession in an unvegetated, recently deglaciated soil. Microb Ecol 53: 110-122.
Nilsen L, Brossard T, Joly D. 1999a. Mapping plant communities in a local Arctic landscape applying a scanned infrared aerial photograph in a geographical information system. Int J Remote Sens 20: 463-480.
Nilsen L, Elvebakk A, Brossard T, Joly D. 1999b. Mapping and analysing arctic vegetation: Evaluating a method coupling numerical classification of vegetation data with SPOT satellite data in a probability model. Int J Remote Sens 20: 2947-2977.
Oh J, Kim BK, Cho WS, Hong SG, Kim KM. 2012. PyroTrimmer: a software with GUI for pre-processing 454 amplicon sequences. J Microbiol 50: 766-769.
Paré MC, Bedard-Haughn A. 2011. Optimum liquid density in separation of the physically uncomplexed organic matter in Arctic soils. Can J Soil Sci 91: 65-68.
Philippot L, Tscherko D, Bru D, Kandeler E. 2011. Distribution of high bacterial taxa across the chronosequence of two alpine glacier forelands. Microb Ecol 61: 303-312.
R Development Core Team. 2011. R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna.
Reddy GSN, Uttam A, Shivaji S. 2008. Bacillus cecembensis sp. nov., isolated from the Pindari glacier of the Indian Himalayas. Int J Syst Evol Microbiol 58: 2330-2335.
Schloss PD, Westcott SL, Ryabin T, Hall JR, Hartmann M, Hollister EB, Lesniewski RA, Oakley BB, Parks DH, Robinson CJ, Sahl JW, Stres B, Thallinger GG, Van Horn DJ, Weber CF. 2009. Introducing mothur: Open-source, platform-independent, community-supported software for describing and comparing microbial communities. Appl Environ Microbiol 75: 7537-7541.
Schmidt SK, Reed SC, Nemergut DR, Grandy AS, Cleveland CC, Weintraub MN, Hill AW, Costello EK, Meyer AF, Neff JC, Martin AM. 2008. The earliest stages of ecosystem succession in high-elevation (5000 metres above sea level), recently deglaciated soils. Proc R Soc B 275: 2793-2802.
Schulz S, Brankatschk R, Dümig A, Kögel-Knabner I, Schloter M, Zeyer J. 2013. The role of microorganisms at different stages of ecosystem development for soil formation. Biogeosciences 10: 3983-3996.
Schütte UM, Abdo Z, Bent SJ, Williams CJ, Schneider GM, Solheim B, Forney LJ. 2009. Bacterial succession in a glacier foreland of the High arctic. ISME J 3: 1258-1268.
Schütte UM, Abdo Z, Foster J, Ravel J, Bunge J, Solheim B, Forney LJ. 2010. Bacterial diversity in a glacier foreland of the high arctic. Mol Ecol 19: 54-66.
Serreze MC, Walsh JE, Chapin III FS, Osterkamp T, Dyurgerov M, Romanovsky V, Oechel WC, Morison J, Zhang T, Barry RG. 2000. Observational evidence of recent change in the northern high-latitude environment. Clim Change 46: 159-207.
Six J, Conant RT, Paul EA, Paustian K. 2002. Stabilization mechanisms of soil organic matter: Implications for Csaturation of soils. Plant Soil 241: 155-176.
Sohi SP, Mahieu N, Powlson DS, Madari B, Smittenberg RH, Gaunt JL. 2005. Investigating the chemical characteristics of soil organic matter fractions suitable for modeling. Soil Sci Soc Am J 69: 1248-1255.
Thomas GW. 1996. Soil pH and acidity. In: Methods of soil analysis. Part 3. SSSA Book Ser. No. 5 (Sparks DL, ed). Soil Science Society of America Inc., Madison, WI, pp 475-490.
Turicchia S, Ventura S, Schütte U, Soldati E, Zielke M, Solheim B. 2005. Biodiversity of the cyanobacterial community in the foreland of the retreating glacier Midtre Lovènbreen, Spitsbergen, Svalbard. Algol Stud 117: 427-440.
Vishnivetskaya TA, Layton AC, Lau MC, Chauhan A, Cheng KR, Meyers AJ, Murphy JR, Rogers AW, Saarunya GS, Williams DE, Pfiffner SM, Biggerstaff JP, Stackhouse BT, Phelps TJ, Whyte L, Sayler GS, Onstott TC. 2014. Commercial DNA extraction kits impact observed microbial community composition in permafrost samples. FEMS Microbiol Ecol 87: 217-230.
Walker LR, Wardle DA, Bardgett RD, Clarkson BD. 2010. The use of chronosequences in studies of ecological succession and soil development. J Ecol 98: 725-736.
Wallenstein MD, McMahon S, Schime J. 2007. Bacterial and fungal community structure in Arctic tundra tussock and shrub soils. FEMS Microbiol Ecol 59: 428-435.
Wander M. 2004. Soil organic matter fractions and their relevance to soil function. In: Soil organic matter in sustainable agriculture (Magdoff F, Ray RW, eds). CRC Press, Boca Raton, FL, pp 67-102.
White DM, Hodkinson ID, Seelen SJ, Coulson SJ. 2007. Characterization of soil carbon from a Svalbard glacier-retreat chronosequence using pyrolysis–GC/MS analysis. J Anal Appl Pyrol 78: 70-75.
Wu X, Zhang W, Liu G, Yang X, Hu P, Chen T, Zhang G, Li Z. 2012. Bacterial diversity in the foreland of the Tianshan No. 1 glacier, China. Environ Res Lett 7: 014038.
Zumsteg A, Luster J, Göransson H, Smittenberg RH, Brunner I, Bernasconi SM, Zeyer J, Frey B. 2012. Bacterial, archaeal and fungal succession in the forefield of a receding glacier. Microb Ecol 63: 552-564.
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